Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Gm5455-201ENSMUST00000058710 715 ntBASIC11.63□□□□□ -0.55
Trim50Q810I2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim50Q810I2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Trim50Q810I2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim50Q810I2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm38241-201ENSMUST00000192641 898 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm4857-201ENSMUST00000192718 785 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm4607-201ENSMUST00000206649 577 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim50Q810I2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim50Q810I2 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.62□□□□□ -0.55
Trim50Q810I2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.61□□□□□ -0.55
Trim50Q810I2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Gm26361-201ENSMUST00000158868 186 ntBASIC11.61□□□□□ -0.55
Trim50Q810I2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.61□□□□□ -0.55
Trim50Q810I2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim50Q810I2 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.61□□□□□ -0.55
Trim50Q810I2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms