Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm22442-201ENSMUST00000157256 144 ntBASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm3793-201ENSMUST00000204973 672 ntBASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm25517-201ENSMUST00000083865 134 ntBASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.19□□□□□ -0.3
Usp6nlQ80XC3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp6nlQ80XC3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm26013-201ENSMUST00000104404 119 ntBASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Usp6nlQ80XC3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms