Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm23757-201ENSMUST00000158353 100 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Mir7076-201ENSMUST00000183519 74 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm3793-201ENSMUST00000204973 672 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm19640-201ENSMUST00000214849 464 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Prpf38bQ80SY5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm11801-201ENSMUST00000117807 746 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm12501-201ENSMUST00000119163 529 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm12948-201ENSMUST00000119406 682 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm12628-201ENSMUST00000122193 382 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Mir6998-201ENSMUST00000183343 64 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm37028-201ENSMUST00000194276 107 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm18038-201ENSMUST00000197900 485 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm6905-201ENSMUST00000205729 511 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm9132-201ENSMUST00000210182 832 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gm35638-201ENSMUST00000220724 652 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Mir339-201ENSMUST00000083659 96 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Prpf38bQ80SY5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms