Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ntng1-201ENSMUST00000051253 327 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh8Q7TSK3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm24514-201ENSMUST00000174961 285 ntBASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm19353-201ENSMUST00000184561 445 ntBASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm3508-201ENSMUST00000186012 792 ntBASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm28686-201ENSMUST00000187404 609 ntBASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh8Q7TSK3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm23251-201ENSMUST00000103773 110 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm11941-201ENSMUST00000119904 610 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm9630-201ENSMUST00000178304 885 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm8343-201ENSMUST00000182705 994 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm4482-201ENSMUST00000200876 742 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm6905-201ENSMUST00000205729 511 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh8Q7TSK3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms