Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.11□□□□□ -0.47
TwistnbQ78WZ7 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Erich3-203ENSMUST00000189969 3460 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm13736-201ENSMUST00000119272 253 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm43002-201ENSMUST00000200310 155 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm45930-201ENSMUST00000221330 292 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TwistnbQ78WZ7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm15920-201ENSMUST00000118998 402 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm42937-201ENSMUST00000197360 752 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TwistnbQ78WZ7 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms