Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Vma21Q78T54 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Vma21Q78T54 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm13875-201ENSMUST00000120162 282 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Rprl1-201ENSMUST00000158050 327 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm2546-201ENSMUST00000182630 991 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm45784-201ENSMUST00000188360 142 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Gm9996-201ENSMUST00000070359 913 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.69□□□□□ -0.86
Vma21Q78T54 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Vma21Q78T54 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Vma21Q78T54 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm15824-201ENSMUST00000119516 955 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm25043-201ENSMUST00000158604 212 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm38241-201ENSMUST00000192641 898 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm37008-201ENSMUST00000195712 319 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Gm17931-201ENSMUST00000208132 634 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.68□□□□□ -0.86
Vma21Q78T54 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Vma21Q78T54 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms