Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm9095-201ENSMUST00000117607 881 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm9097-201ENSMUST00000120514 880 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm26174-201ENSMUST00000158415 219 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm6755-201ENSMUST00000100598 864 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm6740-201ENSMUST00000100617 864 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm11475-201ENSMUST00000118482 476 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.11□□□□□ -0.79
Rif1Q6PR54 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Mir3091-201ENSMUST00000175086 76 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm7082-201ENSMUST00000209880 969 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Gm5451-201ENSMUST00000080545 579 ntBASIC10.11□□□□□ -0.79
Rif1Q6PR54 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm12579-201ENSMUST00000118040 783 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm11511-201ENSMUST00000118146 540 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm12291-201ENSMUST00000121627 311 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.1□□□□□ -0.79
Rif1Q6PR54 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.1□□□□□ -0.79
Rif1Q6PR54 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Rif1Q6PR54 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm7150-201ENSMUST00000122032 981 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm28686-201ENSMUST00000187404 609 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm44315-201ENSMUST00000203041 219 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.09□□□□□ -0.79
Rif1Q6PR54 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rif1Q6PR54 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Rif1Q6PR54 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms