Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Gm12615-201ENSMUST00000177970 382 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm12622-201ENSMUST00000177975 382 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm12627-201ENSMUST00000178412 382 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm12625-201ENSMUST00000179122 382 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm12614-201ENSMUST00000179586 382 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm12613-201ENSMUST00000180323 382 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm5733-201ENSMUST00000190232 939 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nudcd1Q6PIP5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm22334-201ENSMUST00000158070 133 ntBASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm18893-201ENSMUST00000198416 943 ntBASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm9555-201ENSMUST00000200908 583 ntBASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm6905-201ENSMUST00000205729 511 ntBASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ntng1-201ENSMUST00000051253 327 ntBASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Nudcd1Q6PIP5 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm12165-201ENSMUST00000117047 342 ntBASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm24514-201ENSMUST00000174961 285 ntBASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm28686-201ENSMUST00000187404 609 ntBASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.04□□□□□ -0.48
Nudcd1Q6PIP5 Gm1821-202ENSMUST00000227415 750 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms