Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Scaf4Q6PFF0 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm11700-201ENSMUST00000119409 403 ntBASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Snora73a-201ENSMUST00000082453 205 ntBASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.74□□□□□ -0.53
Scaf4Q6PFF0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm12164-201ENSMUST00000121695 551 ntBASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Scaf4Q6PFF0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms