Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Gm5403-201ENSMUST00000117105 2795 ntBASIC14.05□□□□□ -0.16
Scaf8Q6DID3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm24791-201ENSMUST00000104284 131 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm23912-201ENSMUST00000104687 87 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm13351-201ENSMUST00000118087 414 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm12453-201ENSMUST00000121981 331 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm22146-201ENSMUST00000157397 288 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm43852-201ENSMUST00000202098 917 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm44607-201ENSMUST00000205611 1090 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Scaf8Q6DID3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm37826-201ENSMUST00000195329 322 ntBASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm42516-201ENSMUST00000198691 767 ntBASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm3726-201ENSMUST00000203110 785 ntBASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm18561-201ENSMUST00000206027 804 ntBASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Olfr584-201ENSMUST00000098210 964 ntBASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scaf8Q6DID3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.02□□□□□ -0.16
Scaf8Q6DID3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms