Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
AtmQ62388 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
AtmQ62388 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.98□□□□□ -0.65
AtmQ62388 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC10.98□□□□□ -0.65
AtmQ62388 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
AtmQ62388 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.98□□□□□ -0.65
AtmQ62388 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
AtmQ62388 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
AtmQ62388 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.98□□□□□ -0.65
AtmQ62388 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Gm23912-201ENSMUST00000104687 87 ntBASIC10.98□□□□□ -0.65
AtmQ62388 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
AtmQ62388 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.98□□□□□ -0.65
AtmQ62388 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.98□□□□□ -0.65
AtmQ62388 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.98□□□□□ -0.65
AtmQ62388 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
AtmQ62388 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.97□□□□□ -0.65
AtmQ62388 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
AtmQ62388 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
AtmQ62388 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
AtmQ62388 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Gm6612-201ENSMUST00000170777 395 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Gm27444-201ENSMUST00000184157 137 ntBASIC10.97□□□□□ -0.65
AtmQ62388 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
AtmQ62388 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
AtmQ62388 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.97□□□□□ -0.65
AtmQ62388 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
AtmQ62388 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.97□□□□□ -0.65
AtmQ62388 Gm18124-201ENSMUST00000210695 706 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC10.97□□□□□ -0.65
AtmQ62388 Gm2594-201ENSMUST00000214774 742 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC10.97□□□□□ -0.65
AtmQ62388 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
AtmQ62388 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.97□□□□□ -0.65
AtmQ62388 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
AtmQ62388 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
AtmQ62388 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
AtmQ62388 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AtmQ62388 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AtmQ62388 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AtmQ62388 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
AtmQ62388 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
AtmQ62388 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AtmQ62388 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
AtmQ62388 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
AtmQ62388 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
AtmQ62388 Gm26313-201ENSMUST00000157770 308 ntBASIC10.96□□□□□ -0.65
AtmQ62388 Gm16030-201ENSMUST00000159098 603 ntBASIC10.96□□□□□ -0.65
AtmQ62388 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms