Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm8100-201ENSMUST00000182906 988 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm43378-201ENSMUST00000199336 582 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm44100-201ENSMUST00000204329 436 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.09□□□□□ -0.15
Ctr9Q62018 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.09□□□□□ -0.15
Ctr9Q62018 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ctr9Q62018 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ctr9Q62018 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ctr9Q62018 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Ctr9Q62018 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ctr9Q62018 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ctr9Q62018 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ctr9Q62018 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ctr9Q62018 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.08□□□□□ -0.15
Ctr9Q62018 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.08□□□□□ -0.15
Ctr9Q62018 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ctr9Q62018 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ctr9Q62018 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.08□□□□□ -0.16
Ctr9Q62018 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.08□□□□□ -0.16
Ctr9Q62018 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm13045-201ENSMUST00000119019 712 ntBASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm11941-201ENSMUST00000119904 610 ntBASIC14.08□□□□□ -0.16
Ctr9Q62018 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ctr9Q62018 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm37246-201ENSMUST00000192665 835 ntBASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.08□□□□□ -0.16
Ctr9Q62018 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ctr9Q62018 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ctr9Q62018 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.08□□□□□ -0.16
Ctr9Q62018 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms