Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gli3Q61602 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.66■□□□□ 0.1
Gli3Q61602 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gli3Q61602 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC15.66■□□□□ 0.1
Gli3Q61602 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gli3Q61602 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Gli3Q61602 Mir3100-201ENSMUST00000174918 65 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm9409-201ENSMUST00000197017 316 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm18555-201ENSMUST00000197935 584 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC15.66■□□□□ 0.1
Gli3Q61602 Gm23458-201ENSMUST00000083257 169 ntBASIC15.66■□□□□ 0.1
Gli3Q61602 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gli3Q61602 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm37582-201ENSMUST00000192953 1409 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm42498-201ENSMUST00000199981 1372 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC15.65■□□□□ 0.1
Gli3Q61602 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Gli3Q61602 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm12947-201ENSMUST00000116114 420 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Gm14227-201ENSMUST00000119431 629 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm5526-201ENSMUST00000153604 423 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm18014-201ENSMUST00000183369 817 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Gm19927-201ENSMUST00000185792 781 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Gm38135-201ENSMUST00000195068 502 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Gm42908-201ENSMUST00000197508 870 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm18164-201ENSMUST00000213769 927 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Gm18166-201ENSMUST00000215557 927 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Gli3Q61602 Gm3926-201ENSMUST00000223378 1123 ntBASIC15.65■□□□□ 0.1
Gli3Q61602 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gli3Q61602 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gli3Q61602 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC15.64■□□□□ 0.09
Gli3Q61602 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gli3Q61602 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Gm12435-201ENSMUST00000118949 1016 ntBASIC15.64■□□□□ 0.09
Gli3Q61602 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gli3Q61602 Gm26943-201ENSMUST00000182295 957 ntBASIC15.64■□□□□ 0.09
Gli3Q61602 Gm2566-201ENSMUST00000201267 431 ntBASIC15.64■□□□□ 0.09
Gli3Q61602 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gli3Q61602 AC164429.1-201ENSMUST00000224210 518 ntBASIC15.64■□□□□ 0.09
Gli3Q61602 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gli3Q61602 Gm37651-201ENSMUST00000194679 1494 ntBASIC15.64■□□□□ 0.09
Gli3Q61602 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gli3Q61602 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Gli3Q61602 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gli3Q61602 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Gli3Q61602 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms