Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col11a1Q61245 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm23769-201ENSMUST00000104441 121 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm13981-201ENSMUST00000122360 447 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC13.09□□□□□ -0.31
Col11a1Q61245 CT025603.1-201ENSMUST00000224040 448 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 AC169511.1-201ENSMUST00000227639 995 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm24078-201ENSMUST00000158184 103 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gm9204-201ENSMUST00000212641 947 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Id2-203ENSMUST00000222667 958 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.09□□□□□ -0.31
Col11a1Q61245 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col11a1Q61245 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col11a1Q61245 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col11a1Q61245 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Col11a1Q61245 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Col11a1Q61245 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Col11a1Q61245 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Snord23-201ENSMUST00000116828 109 ntBASIC13.08□□□□□ -0.32
Col11a1Q61245 Gm1826-201ENSMUST00000118646 1162 ntBASIC13.08□□□□□ -0.32
Col11a1Q61245 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.08□□□□□ -0.32
Col11a1Q61245 Gm44124-201ENSMUST00000204159 472 ntBASIC13.08□□□□□ -0.32
Col11a1Q61245 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC13.08□□□□□ -0.32
Col11a1Q61245 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.08□□□□□ -0.32
Col11a1Q61245 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.08□□□□□ -0.32
Col11a1Q61245 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.08□□□□□ -0.32
Col11a1Q61245 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col11a1Q61245 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col11a1Q61245 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col11a1Q61245 Gm15136-201ENSMUST00000120552 533 ntBASIC13.07□□□□□ -0.32
Col11a1Q61245 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms