Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Gm2423-201ENSMUST00000074863 733 ntBASIC14.36□□□□□ -0.11
Mre11Q61216 Gm26232-201ENSMUST00000083360 166 ntBASIC14.36□□□□□ -0.11
Mre11Q61216 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.36□□□□□ -0.11
Mre11Q61216 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mre11Q61216 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Mre11Q61216 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Mre11Q61216 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Mre11Q61216 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.35□□□□□ -0.11
Mre11Q61216 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm15321-201ENSMUST00000121290 288 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.35□□□□□ -0.11
Mre11Q61216 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm27437-201ENSMUST00000183429 107 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Gm44855-201ENSMUST00000205725 362 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm6007-201ENSMUST00000208170 823 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.35□□□□□ -0.11
Mre11Q61216 Gm807-202ENSMUST00000224929 408 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Mre11Q61216 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 AC154171.2-201ENSMUST00000225219 2652 ntBASIC14.35□□□□□ -0.11
Mre11Q61216 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mre11Q61216 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14.34□□□□□ -0.11
Mre11Q61216 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 AC122291.1-201ENSMUST00000228937 5748 ntBASIC14.34□□□□□ -0.11
Mre11Q61216 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mre11Q61216 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.34□□□□□ -0.11
Mre11Q61216 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.34□□□□□ -0.11
Mre11Q61216 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mre11Q61216 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mre11Q61216 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mre11Q61216 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mre11Q61216 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Mre11Q61216 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Mre11Q61216 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mre11Q61216 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms