Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tcf4Q60722 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm38317-201ENSMUST00000195564 343 ntBASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.41□□□□□ -0.42
Tcf4Q60722 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm5455-201ENSMUST00000058710 715 ntBASIC12.41□□□□□ -0.42
Tcf4Q60722 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tcf4Q60722 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tcf4Q60722 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm13350-201ENSMUST00000120519 479 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm44364-201ENSMUST00000198368 141 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Rprl1-202ENSMUST00000198476 238 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm3961-201ENSMUST00000204425 994 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm44967-201ENSMUST00000207047 631 ntBASIC12.4□□□□□ -0.42
Tcf4Q60722 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tcf4Q60722 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tcf4Q60722 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.4□□□□□ -0.43
Tcf4Q60722 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tcf4Q60722 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tcf4Q60722 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 Gm14381-201ENSMUST00000122105 414 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.39□□□□□ -0.43
Tcf4Q60722 Mir6420-201ENSMUST00000185032 102 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.39□□□□□ -0.43
Tcf4Q60722 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.39□□□□□ -0.43
Tcf4Q60722 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tcf4Q60722 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms