Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.48□□□□□ -0.57
ClpbQ60649 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ClpbQ60649 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpbQ60649 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ClpbQ60649 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ClpbQ60649 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Gm14644-201ENSMUST00000116671 647 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
ClpbQ60649 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.47□□□□□ -0.57
ClpbQ60649 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ClpbQ60649 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Gm2260-201ENSMUST00000184965 657 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Gm45186-201ENSMUST00000206874 478 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Gm8385-201ENSMUST00000058999 643 ntBASIC11.47□□□□□ -0.57
ClpbQ60649 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
ClpbQ60649 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.47□□□□□ -0.57
ClpbQ60649 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpbQ60649 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.46□□□□□ -0.57
ClpbQ60649 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.46□□□□□ -0.57
ClpbQ60649 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ClpbQ60649 Gm13996-201ENSMUST00000118456 430 ntBASIC11.46□□□□□ -0.57
ClpbQ60649 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.46□□□□□ -0.57
ClpbQ60649 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.46□□□□□ -0.57
ClpbQ60649 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.46□□□□□ -0.57
ClpbQ60649 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.46□□□□□ -0.57
ClpbQ60649 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.46□□□□□ -0.57
ClpbQ60649 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpbQ60649 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
ClpbQ60649 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
ClpbQ60649 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
ClpbQ60649 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms