Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gm12015-201ENSMUST00000117065 843 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gzmn-202ENSMUST00000225535 989 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav5d-4Q5R1F6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gm14109-201ENSMUST00000118814 309 ntBASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gm6963-201ENSMUST00000147879 379 ntBASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav5d-4Q5R1F6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms