Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm22920-201ENSMUST00000102175 109 ntBASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm15003-201ENSMUST00000118884 446 ntBASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm7211-201ENSMUST00000172692 1118 ntBASIC20.78■□□□□ 0.92
Trim41Q5NCC3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm17931-201ENSMUST00000208132 634 ntBASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Trim41Q5NCC3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Gm9034-201ENSMUST00000182071 1005 ntBASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Gm8531-201ENSMUST00000188319 893 ntBASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Gm36943-201ENSMUST00000194422 282 ntBASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim41Q5NCC3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm6903-201ENSMUST00000160509 1366 ntBASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm22594-201ENSMUST00000104251 130 ntBASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm22711-201ENSMUST00000116890 133 ntBASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm8737-201ENSMUST00000122208 642 ntBASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm38117-201ENSMUST00000194653 939 ntBASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 CT009536.2-201ENSMUST00000225370 665 ntBASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim41Q5NCC3 Gm37348-201ENSMUST00000193104 1789 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm4462-201ENSMUST00000166453 492 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm20414-201ENSMUST00000172918 646 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm29499-201ENSMUST00000189151 486 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm28329-201ENSMUST00000191208 689 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm29171-201ENSMUST00000191397 486 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm42433-201ENSMUST00000196806 940 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm44158-201ENSMUST00000203881 505 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm6855-201ENSMUST00000206307 790 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 BC106175-202ENSMUST00000219344 1213 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm38385-201ENSMUST00000194454 2351 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Gm5641-201ENSMUST00000091130 1488 ntBASIC20.75■□□□□ 0.91
Trim41Q5NCC3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim41Q5NCC3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms