Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Gm25766-201ENSMUST00000104101 131 ntBASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Gm22442-201ENSMUST00000157256 144 ntBASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Gm42599-201ENSMUST00000201308 469 ntBASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Gm17825-201ENSMUST00000206836 794 ntBASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 AC174797.2-202ENSMUST00000225729 568 ntBASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Gm23680-201ENSMUST00000083162 164 ntBASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Puf60Q3UEB3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm17213-201ENSMUST00000165161 1360 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm6655-201ENSMUST00000201932 1309 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm4900-201ENSMUST00000222046 1628 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm26047-201ENSMUST00000157308 113 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Mir6407-201ENSMUST00000184510 101 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm29410-201ENSMUST00000188383 694 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm26047-202ENSMUST00000198840 115 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 CT573047.1-201ENSMUST00000223652 851 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 n-R5s211-201ENSMUST00000093689 119 ntBASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Puf60Q3UEB3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm3671-201ENSMUST00000182463 1007 ntBASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm19091-201ENSMUST00000208120 978 ntBASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 AC136376.2-201ENSMUST00000228819 490 ntBASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Puf60Q3UEB3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Puf60Q3UEB3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms