Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.24□□□□□ -0.61
Brf2Q3UAW9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm44364-201ENSMUST00000198368 141 ntBASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm45598-202ENSMUST00000210719 986 ntBASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Brf2Q3UAW9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Mir8109-201ENSMUST00000184375 117 ntBASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm45865-201ENSMUST00000211815 945 ntBASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.23□□□□□ -0.61
Brf2Q3UAW9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Brf2Q3UAW9 Gm14381-201ENSMUST00000122105 414 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms