Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim43aQ3TL54 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trim43aQ3TL54 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43aQ3TL54 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.65□□□□□ -0.39
Trim43aQ3TL54 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trim43aQ3TL54 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Trim43aQ3TL54 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm6222-202ENSMUST00000182143 629 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm38002-201ENSMUST00000193255 180 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm18054-201ENSMUST00000207539 555 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 BC043934-202ENSMUST00000185694 2356 ntBASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim43aQ3TL54 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Gm45880-201ENSMUST00000213041 853 ntBASIC12.63□□□□□ -0.39
Trim43aQ3TL54 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim43aQ3TL54 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms