Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Ush2AQ2QI47 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Gm11652-201ENSMUST00000117842 1267 ntBASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Ush2AQ2QI47 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm6141-201ENSMUST00000117181 695 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm23220-201ENSMUST00000158115 137 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 AC151971.6-201ENSMUST00000216193 866 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 AC102569.1-201ENSMUST00000221563 685 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm7104-201ENSMUST00000179741 2532 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm19863-201ENSMUST00000192480 2218 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm4753-201ENSMUST00000188327 1255 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm7997-201ENSMUST00000210546 980 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 AC154589.2-201ENSMUST00000228847 251 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm42589-201ENSMUST00000199097 1751 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 AC125487.1-201ENSMUST00000217888 1300 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm37160-201ENSMUST00000193081 1689 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm12377-201ENSMUST00000118656 252 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Ush2AQ2QI47 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms