Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm14193-201ENSMUST00000105067 153 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm12419-201ENSMUST00000116649 636 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm15352-201ENSMUST00000118696 270 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm4654-201ENSMUST00000183305 982 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm28388-201ENSMUST00000186262 437 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm37458-201ENSMUST00000194055 410 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm8365-201ENSMUST00000197334 648 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm6450-201ENSMUST00000200896 574 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm17831-201ENSMUST00000205579 900 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm45219-201ENSMUST00000205602 465 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm10752-201ENSMUST00000218348 729 ntBASIC12.9□□□□□ -0.34
Col9a2Q07643 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col9a2Q07643 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a2Q07643 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col9a2Q07643 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Col9a2Q07643 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col9a2Q07643 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Gm12899-201ENSMUST00000120565 551 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Gm14585-201ENSMUST00000120713 634 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Gm45398-201ENSMUST00000210561 165 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.89□□□□□ -0.35
Col9a2Q07643 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col9a2Q07643 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a2Q07643 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm25076-201ENSMUST00000104098 132 ntBASIC12.88□□□□□ -0.35
Col9a2Q07643 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm11340-201ENSMUST00000119226 412 ntBASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm11783-201ENSMUST00000119549 885 ntBASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm14460-201ENSMUST00000121511 639 ntBASIC12.88□□□□□ -0.35
Col9a2Q07643 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col9a2Q07643 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms