Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.8□□□□□ -0.52
Atf4Q06507 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.8□□□□□ -0.52
Atf4Q06507 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm2541-201ENSMUST00000161209 711 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm17208-201ENSMUST00000168388 535 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Atf4Q06507 Mir7221-201ENSMUST00000184009 72 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm18492-201ENSMUST00000198141 1018 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm42710-201ENSMUST00000200608 985 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Gm44837-201ENSMUST00000206863 717 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC11.8□□□□□ -0.52
Atf4Q06507 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Atf4Q06507 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.8□□□□□ -0.52
Atf4Q06507 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Atf4Q06507 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Atf4Q06507 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf4Q06507 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm37953-201ENSMUST00000195293 1884 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.79□□□□□ -0.52
Atf4Q06507 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Atf4Q06507 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm12792-201ENSMUST00000117669 1019 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Gm12502-201ENSMUST00000120197 444 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Gm26361-201ENSMUST00000158868 186 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Gm2546-201ENSMUST00000182630 991 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm42752-201ENSMUST00000198394 1106 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Gm44405-201ENSMUST00000198952 126 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf4Q06507 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Atf4Q06507 Gm29794-201ENSMUST00000218919 1247 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 AC116589.4-201ENSMUST00000222390 216 ntBASIC11.79□□□□□ -0.52
Atf4Q06507 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Atf4Q06507 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Atf4Q06507 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Atf4Q06507 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf4Q06507 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms