Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm19931-201ENSMUST00000198920 368 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm25053-202ENSMUST00000199731 132 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 AC192616.3-201ENSMUST00000220797 1124 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.05□□□□□ -0.48
Col9a1Q05722 Gm15071-201ENSMUST00000118189 1366 ntBASIC12.05□□□□□ -0.48
Col9a1Q05722 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col9a1Q05722 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm23769-201ENSMUST00000104441 121 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm26143-201ENSMUST00000104480 108 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm12105-201ENSMUST00000120846 779 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm43136-201ENSMUST00000200403 636 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm6290-201ENSMUST00000207666 1158 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC12.04□□□□□ -0.48
Col9a1Q05722 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 AC153646.1-201ENSMUST00000223229 1279 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 CT571271.1-201ENSMUST00000227071 670 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Col9a1Q05722 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.04□□□□□ -0.48
Col9a1Q05722 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col9a1Q05722 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.03□□□□□ -0.48
Col9a1Q05722 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm23912-201ENSMUST00000104687 87 ntBASIC12.03□□□□□ -0.48
Col9a1Q05722 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col9a1Q05722 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col9a1Q05722 Gm14921-201ENSMUST00000118643 908 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms