Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VcpQ01853 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Gm12314-201ENSMUST00000118104 538 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.77□□□□□ -0.37
VcpQ01853 Gm6963-201ENSMUST00000147879 379 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.77□□□□□ -0.37
VcpQ01853 Gm28882-201ENSMUST00000185504 314 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
VcpQ01853 Gm18304-201ENSMUST00000189162 546 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Gm32999-201ENSMUST00000192693 562 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Gm37905-201ENSMUST00000195310 341 ntBASIC12.77□□□□□ -0.37
VcpQ01853 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.77□□□□□ -0.37
VcpQ01853 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
VcpQ01853 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VcpQ01853 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
VcpQ01853 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VcpQ01853 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VcpQ01853 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
VcpQ01853 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.76□□□□□ -0.37
VcpQ01853 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.76□□□□□ -0.37
VcpQ01853 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.76□□□□□ -0.37
VcpQ01853 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
VcpQ01853 Gm42937-201ENSMUST00000197360 752 ntBASIC12.76□□□□□ -0.37
VcpQ01853 Gm35960-201ENSMUST00000202712 767 ntBASIC12.76□□□□□ -0.37
VcpQ01853 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.76□□□□□ -0.37
VcpQ01853 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
VcpQ01853 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.76□□□□□ -0.37
VcpQ01853 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
VcpQ01853 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
VcpQ01853 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VcpQ01853 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.75□□□□□ -0.37
VcpQ01853 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
VcpQ01853 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.75□□□□□ -0.37
VcpQ01853 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
VcpQ01853 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VcpQ01853 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Gm15515-201ENSMUST00000117827 822 ntBASIC12.75□□□□□ -0.37
VcpQ01853 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
VcpQ01853 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VcpQ01853 Gm29615-201ENSMUST00000185371 697 ntBASIC12.75□□□□□ -0.37
VcpQ01853 Gm28224-201ENSMUST00000186078 697 ntBASIC12.75□□□□□ -0.37
VcpQ01853 Gm29001-201ENSMUST00000186177 697 ntBASIC12.75□□□□□ -0.37
VcpQ01853 Gm28292-201ENSMUST00000186593 697 ntBASIC12.75□□□□□ -0.37
VcpQ01853 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VcpQ01853 Gm28101-201ENSMUST00000187608 697 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms