Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.52□□□□□ -0.24
GabpaQ00422 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.52□□□□□ -0.24
GabpaQ00422 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.52□□□□□ -0.24
GabpaQ00422 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GabpaQ00422 Gm16166-201ENSMUST00000118291 787 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm16071-201ENSMUST00000119589 793 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm11246-201ENSMUST00000120880 345 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.52□□□□□ -0.25
GabpaQ00422 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Gm3150-201ENSMUST00000166418 204 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.52□□□□□ -0.25
GabpaQ00422 Gm23771-201ENSMUST00000178702 110 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm4654-201ENSMUST00000183305 982 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm17826-201ENSMUST00000189720 798 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm38151-201ENSMUST00000195085 289 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm44980-201ENSMUST00000205826 314 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm44506-201ENSMUST00000206278 965 ntBASIC13.52□□□□□ -0.25
GabpaQ00422 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.52□□□□□ -0.25
GabpaQ00422 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.52□□□□□ -0.25
GabpaQ00422 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GabpaQ00422 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
GabpaQ00422 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.51□□□□□ -0.25
GabpaQ00422 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GabpaQ00422 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
GabpaQ00422 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.51□□□□□ -0.25
GabpaQ00422 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.51□□□□□ -0.25
GabpaQ00422 Gm22138-201ENSMUST00000158748 128 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
GabpaQ00422 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Gm12407-201ENSMUST00000180219 324 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Gm43520-201ENSMUST00000197996 164 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GabpaQ00422 Gm7940-201ENSMUST00000218195 769 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GabpaQ00422 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
GabpaQ00422 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GabpaQ00422 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GabpaQ00422 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.51□□□□□ -0.25
GabpaQ00422 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GabpaQ00422 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GabpaQ00422 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.5□□□□□ -0.25
GabpaQ00422 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm11783-201ENSMUST00000119549 885 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Gm14441-201ENSMUST00000121960 540 ntBASIC13.5□□□□□ -0.25
GabpaQ00422 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GabpaQ00422 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.5□□□□□ -0.25
GabpaQ00422 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms