Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Thumpd3P97770 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Thumpd3P97770 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.15□□□□□ -0.47
Thumpd3P97770 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Thumpd3P97770 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Thumpd3P97770 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Thumpd3P97770 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Thumpd3P97770 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm8018-201ENSMUST00000173536 789 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm30285-201ENSMUST00000214614 422 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm22058-201ENSMUST00000083393 310 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Thumpd3P97770 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.14□□□□□ -0.47
Thumpd3P97770 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.14□□□□□ -0.47
Thumpd3P97770 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.14□□□□□ -0.47
Thumpd3P97770 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd3P97770 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.13□□□□□ -0.47
Thumpd3P97770 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Gm23119-201ENSMUST00000158610 140 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.13□□□□□ -0.47
Thumpd3P97770 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.13□□□□□ -0.47
Thumpd3P97770 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Thumpd3P97770 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd3P97770 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms