Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
Nkx3-2P97503 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nkx3-2P97503 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.33□□□□□ -0.6
Nkx3-2P97503 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm11511-201ENSMUST00000118146 540 ntBASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm15711-201ENSMUST00000118889 535 ntBASIC11.32□□□□□ -0.6
Nkx3-2P97503 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Mir7677-201ENSMUST00000184226 67 ntBASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.32□□□□□ -0.6
Nkx3-2P97503 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.32□□□□□ -0.6
Nkx3-2P97503 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx3-2P97503 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.31□□□□□ -0.6
Nkx3-2P97503 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Rprl1-201ENSMUST00000158050 327 ntBASIC11.31□□□□□ -0.6
Nkx3-2P97503 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm8343-201ENSMUST00000182705 994 ntBASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm17827-201ENSMUST00000211825 742 ntBASIC11.31□□□□□ -0.6
Nkx3-2P97503 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.31□□□□□ -0.6
Nkx3-2P97503 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.31□□□□□ -0.6
Nkx3-2P97503 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx3-2P97503 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms