Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm11340-201ENSMUST00000119226 412 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm25492-201ENSMUST00000157383 129 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm43163-201ENSMUST00000196571 442 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm18561-201ENSMUST00000206027 804 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm18059-201ENSMUST00000208073 580 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm4978-201ENSMUST00000071565 801 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Gm21759-201ENSMUST00000178345 1828 ntBASIC14.91□□□□□ -0.02
Nkx2-3P97334 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkx2-3P97334 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.91□□□□□ -0.02
Nkx2-3P97334 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.9□□□□□ -0.02
Nkx2-3P97334 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-3P97334 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm15549-201ENSMUST00000121595 622 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm25554-201ENSMUST00000158075 113 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm8723-201ENSMUST00000166076 820 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm8701-201ENSMUST00000169259 874 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm8197-202ENSMUST00000193422 934 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14.89□□□□□ -0.03
Nkx2-3P97334 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-3P97334 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms