Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 Gm7572-201ENSMUST00000182616 766 ntBASIC19.17■□□□□ 0.66
Cux2P70298 Mir6359-201ENSMUST00000183668 81 ntBASIC19.17■□□□□ 0.66
Cux2P70298 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC19.17■□□□□ 0.66
Cux2P70298 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC19.17■□□□□ 0.66
Cux2P70298 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 AC154589.2-201ENSMUST00000228847 251 ntBASIC19.17■□□□□ 0.66
Cux2P70298 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cux2P70298 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 Prss23os-202ENSMUST00000179361 1362 ntBASIC19.16■□□□□ 0.66
Cux2P70298 AC154354.1-203ENSMUST00000225565 1364 ntBASIC19.16■□□□□ 0.66
Cux2P70298 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC19.16■□□□□ 0.66
Cux2P70298 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Gm3828-201ENSMUST00000121817 257 ntBASIC19.16■□□□□ 0.66
Cux2P70298 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cux2P70298 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC19.16■□□□□ 0.66
Cux2P70298 Gm19013-201ENSMUST00000183895 1222 ntBASIC19.16■□□□□ 0.66
Cux2P70298 Gm19014-201ENSMUST00000184828 1189 ntBASIC19.16■□□□□ 0.66
Cux2P70298 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC19.16■□□□□ 0.66
Cux2P70298 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC19.16■□□□□ 0.66
Cux2P70298 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cux2P70298 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cux2P70298 Gm19863-201ENSMUST00000192480 2218 ntBASIC19.16■□□□□ 0.66
Cux2P70298 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Cux2P70298 AC123834.1-201ENSMUST00000225346 2043 ntBASIC19.15■□□□□ 0.66
Cux2P70298 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Cux2P70298 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cux2P70298 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Cux2P70298 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
Cux2P70298 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cux2P70298 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC19.15■□□□□ 0.66
Cux2P70298 Gm6478-201ENSMUST00000099450 742 ntBASIC19.15■□□□□ 0.66
Cux2P70298 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cux2P70298 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC19.15■□□□□ 0.66
Cux2P70298 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cux2P70298 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cux2P70298 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Cux2P70298 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cux2P70298 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cux2P70298 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Gm44190-201ENSMUST00000205083 1401 ntBASIC19.14■□□□□ 0.65
Cux2P70298 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Cux2P70298 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Gm11960-201ENSMUST00000122068 925 ntBASIC19.14■□□□□ 0.65
Cux2P70298 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Gm5529-201ENSMUST00000165691 891 ntBASIC19.14■□□□□ 0.65
Cux2P70298 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cux2P70298 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC19.14■□□□□ 0.65
Cux2P70298 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms