Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lsm3P62311 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Lsm3P62311 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.81□□□□□ -0.68
Lsm3P62311 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Lsm3P62311 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
Lsm3P62311 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Snord83b-201ENSMUST00000104546 94 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Gm11618-201ENSMUST00000117946 267 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Gm16479-201ENSMUST00000121706 932 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Gm13123-201ENSMUST00000122173 492 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.8□□□□□ -0.68
Lsm3P62311 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.8□□□□□ -0.68
Lsm3P62311 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Lsm3P62311 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Lsm3P62311 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.79□□□□□ -0.68
Lsm3P62311 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Gm11597-201ENSMUST00000121423 964 ntBASIC10.79□□□□□ -0.68
Lsm3P62311 Gm26185-201ENSMUST00000157692 266 ntBASIC10.79□□□□□ -0.68
Lsm3P62311 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Gm27741-201ENSMUST00000185060 237 ntBASIC10.79□□□□□ -0.68
Lsm3P62311 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.79□□□□□ -0.68
Lsm3P62311 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.79□□□□□ -0.68
Lsm3P62311 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Lsm3P62311 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.79□□□□□ -0.68
Lsm3P62311 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Lsm3P62311 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms