Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Cks1bP61025 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Cks1bP61025 Gm4735-201ENSMUST00000138679 1302 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Gm5855-201ENSMUST00000200240 1305 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC8.54□□□□□ -1.04
Cks1bP61025 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm38049-201ENSMUST00000195698 1372 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm12539-201ENSMUST00000121549 1098 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Gm15487-201ENSMUST00000122373 465 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm24694-201ENSMUST00000180054 110 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Gm27663-201ENSMUST00000184839 110 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Gm44397-201ENSMUST00000195950 113 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Gm18307-201ENSMUST00000206864 949 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC8.54□□□□□ -1.04
Cks1bP61025 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm6983-201ENSMUST00000214912 628 ntBASIC8.54□□□□□ -1.04
Cks1bP61025 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.54□□□□□ -1.04
Cks1bP61025 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Cks1bP61025 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Cks1bP61025 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cks1bP61025 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.53□□□□□ -1.04
Cks1bP61025 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC8.53□□□□□ -1.04
Cks1bP61025 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.53□□□□□ -1.04
Cks1bP61025 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cks1bP61025 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms