Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm43184-201ENSMUST00000197247 542 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm18038-201ENSMUST00000197900 485 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm19287-201ENSMUST00000203190 358 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Gm5705-201ENSMUST00000066241 711 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.27□□□□□ -0.61
Nup43P59235 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.27□□□□□ -0.61
Nup43P59235 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Nup43P59235 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nup43P59235 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Gm8343-201ENSMUST00000182705 994 ntBASIC11.26□□□□□ -0.61
Nup43P59235 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Gm29199-201ENSMUST00000187766 775 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Gm35960-201ENSMUST00000202712 767 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Gm44044-201ENSMUST00000205178 1089 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.26□□□□□ -0.61
Nup43P59235 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.26□□□□□ -0.61
Nup43P59235 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Gm18730-201ENSMUST00000218038 343 ntBASIC11.26□□□□□ -0.61
Nup43P59235 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nup43P59235 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nup43P59235 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nup43P59235 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nup43P59235 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.25□□□□□ -0.61
Nup43P59235 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.25□□□□□ -0.61
Nup43P59235 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Gm11439-201ENSMUST00000118598 409 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Gm15004-201ENSMUST00000119192 630 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Gm12997-201ENSMUST00000120207 640 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.25□□□□□ -0.61
Nup43P59235 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Nup43P59235 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Gm270-201ENSMUST00000223010 976 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Nup43P59235 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nup43P59235 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Nup43P59235 Gm26448-201ENSMUST00000082446 203 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.25□□□□□ -0.61
Nup43P59235 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Nup43P59235 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nup43P59235 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nup43P59235 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms