Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm3551-201ENSMUST00000190750 664 ntBASIC12.13□□□□□ -0.47
Ddx6P54823 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.13□□□□□ -0.47
Ddx6P54823 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ddx6P54823 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.13□□□□□ -0.47
Ddx6P54823 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ddx6P54823 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx6P54823 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ddx6P54823 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.12□□□□□ -0.47
Ddx6P54823 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Gm16071-201ENSMUST00000119589 793 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm8194-201ENSMUST00000159783 859 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.12□□□□□ -0.47
Ddx6P54823 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm17826-201ENSMUST00000189720 798 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Gm9136-201ENSMUST00000193368 454 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Gm42599-201ENSMUST00000201308 469 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.12□□□□□ -0.47
Ddx6P54823 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ddx6P54823 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.12□□□□□ -0.47
Ddx6P54823 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ddx6P54823 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx6P54823 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Ddx6P54823 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Gm15782-201ENSMUST00000121073 445 ntBASIC12.11□□□□□ -0.47
Ddx6P54823 Gm14441-201ENSMUST00000121960 540 ntBASIC12.11□□□□□ -0.47
Ddx6P54823 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.11□□□□□ -0.47
Ddx6P54823 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.11□□□□□ -0.47
Ddx6P54823 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.11□□□□□ -0.47
Ddx6P54823 Gm10752-201ENSMUST00000218348 729 ntBASIC12.11□□□□□ -0.47
Ddx6P54823 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx6P54823 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx6P54823 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms