Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Atxn1P54254 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atxn1P54254 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Atxn1P54254 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Atxn1P54254 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.89□□□□□ -0.51
Atxn1P54254 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.88□□□□□ -0.51
Atxn1P54254 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.88□□□□□ -0.51
Atxn1P54254 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Atxn1P54254 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Gm12857-201ENSMUST00000117678 592 ntBASIC11.88□□□□□ -0.51
Atxn1P54254 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.88□□□□□ -0.51
Atxn1P54254 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.88□□□□□ -0.51
Atxn1P54254 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.88□□□□□ -0.51
Atxn1P54254 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Atxn1P54254 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Atxn1P54254 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Gm2875-201ENSMUST00000211333 360 ntBASIC11.88□□□□□ -0.51
Atxn1P54254 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.88□□□□□ -0.51
Atxn1P54254 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Atxn1P54254 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Atxn1P54254 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Atxn1P54254 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Atxn1P54254 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 Gm13549-201ENSMUST00000118339 796 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Gm15036-201ENSMUST00000118880 400 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Gm12990-201ENSMUST00000120372 468 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Gm11354-201ENSMUST00000121974 422 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Atxn1P54254 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Gm17877-201ENSMUST00000192578 814 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.87□□□□□ -0.51
Atxn1P54254 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Atxn1P54254 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.87□□□□□ -0.51
Atxn1P54254 Gm19009-201ENSMUST00000223072 823 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.87□□□□□ -0.51
Atxn1P54254 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms