Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Sox1P53783 Gm12274-201ENSMUST00000120062 385 ntBASIC12.2□□□□□ -0.46
Sox1P53783 Gm13981-201ENSMUST00000122360 447 ntBASIC12.2□□□□□ -0.46
Sox1P53783 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox1P53783 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox1P53783 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox1P53783 Gm20694-201ENSMUST00000176943 404 ntBASIC12.2□□□□□ -0.46
Sox1P53783 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.2□□□□□ -0.46
Sox1P53783 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
Sox1P53783 Gm2474-201ENSMUST00000195162 559 ntBASIC12.2□□□□□ -0.46
Sox1P53783 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox1P53783 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.2□□□□□ -0.46
Sox1P53783 Gm26670-202ENSMUST00000226862 340 ntBASIC12.2□□□□□ -0.46
Sox1P53783 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox1P53783 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox1P53783 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.19□□□□□ -0.46
Sox1P53783 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Sox1P53783 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Sox1P53783 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.19□□□□□ -0.46
Sox1P53783 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox1P53783 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox1P53783 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox1P53783 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Mir8093-201ENSMUST00000185043 137 ntBASIC12.19□□□□□ -0.46
Sox1P53783 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Gm37365-201ENSMUST00000193109 409 ntBASIC12.19□□□□□ -0.46
Sox1P53783 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sox1P53783 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.19□□□□□ -0.46
Sox1P53783 BC080696-201ENSMUST00000202858 1218 ntBASIC12.19□□□□□ -0.46
Sox1P53783 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.19□□□□□ -0.46
Sox1P53783 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.19□□□□□ -0.46
Sox1P53783 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.19□□□□□ -0.46
Sox1P53783 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox1P53783 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox1P53783 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.19□□□□□ -0.46
Sox1P53783 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.19□□□□□ -0.46
Sox1P53783 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.19□□□□□ -0.46
Sox1P53783 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox1P53783 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox1P53783 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox1P53783 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox1P53783 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox1P53783 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms