Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Gm9211-201ENSMUST00000182882 975 ntBASIC11.33□□□□□ -0.6
RoraP51448 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.33□□□□□ -0.6
RoraP51448 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
RoraP51448 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.33□□□□□ -0.6
RoraP51448 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.33□□□□□ -0.6
RoraP51448 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RoraP51448 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RoraP51448 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.33□□□□□ -0.6
RoraP51448 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RoraP51448 Mir1943-201ENSMUST00000158276 73 ntBASIC11.32□□□□□ -0.6
RoraP51448 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.32□□□□□ -0.6
RoraP51448 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RoraP51448 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.32□□□□□ -0.6
RoraP51448 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.32□□□□□ -0.6
RoraP51448 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.32□□□□□ -0.6
RoraP51448 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.32□□□□□ -0.6
RoraP51448 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.32□□□□□ -0.6
RoraP51448 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RoraP51448 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RoraP51448 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.31□□□□□ -0.6
RoraP51448 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.31□□□□□ -0.6
RoraP51448 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RoraP51448 Gm12165-201ENSMUST00000117047 342 ntBASIC11.31□□□□□ -0.6
RoraP51448 Gm14724-201ENSMUST00000118400 537 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms