Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rfx2P48379 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rfx2P48379 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Rfx2P48379 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx2P48379 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx2P48379 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.52□□□□□ -0.4
Rfx2P48379 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx2P48379 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.52□□□□□ -0.4
Rfx2P48379 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx2P48379 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rfx2P48379 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Rfx2P48379 Gm23912-201ENSMUST00000104687 87 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rfx2P48379 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.52□□□□□ -0.41
Rfx2P48379 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rfx2P48379 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 Gm43184-201ENSMUST00000197247 542 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 Gm18711-201ENSMUST00000199341 750 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 Gm5455-201ENSMUST00000058710 715 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rfx2P48379 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rfx2P48379 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.52□□□□□ -0.41
Rfx2P48379 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.52□□□□□ -0.41
Rfx2P48379 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.52□□□□□ -0.41
Rfx2P48379 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.52□□□□□ -0.41
Rfx2P48379 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rfx2P48379 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rfx2P48379 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm13611-201ENSMUST00000118269 318 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm20426-201ENSMUST00000173657 440 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.51□□□□□ -0.41
Rfx2P48379 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm21811-201ENSMUST00000096485 930 ntBASIC12.51□□□□□ -0.41
Rfx2P48379 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rfx2P48379 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.51□□□□□ -0.41
Rfx2P48379 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rfx2P48379 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rfx2P48379 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rfx2P48379 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rfx2P48379 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rfx2P48379 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rfx2P48379 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms