Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm15744-201ENSMUST00000161734 213 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Gm18367-201ENSMUST00000176139 600 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TgfaP48030 Gm29410-201ENSMUST00000188383 694 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.38□□□□□ -0.75
TgfaP48030 Gm5100-201ENSMUST00000195631 589 ntBASIC10.38□□□□□ -0.75
TgfaP48030 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TgfaP48030 Gm35713-201ENSMUST00000210516 199 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.38□□□□□ -0.75
TgfaP48030 Gm9111-201ENSMUST00000219394 709 ntBASIC10.38□□□□□ -0.75
TgfaP48030 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.38□□□□□ -0.75
TgfaP48030 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.38□□□□□ -0.75
TgfaP48030 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TgfaP48030 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TgfaP48030 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.38□□□□□ -0.75
TgfaP48030 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
TgfaP48030 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
TgfaP48030 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.37□□□□□ -0.75
TgfaP48030 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Gm7150-201ENSMUST00000122032 981 ntBASIC10.37□□□□□ -0.75
TgfaP48030 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
TgfaP48030 Gm37458-201ENSMUST00000194055 410 ntBASIC10.37□□□□□ -0.75
TgfaP48030 Gm37981-201ENSMUST00000194280 535 ntBASIC10.37□□□□□ -0.75
TgfaP48030 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.37□□□□□ -0.75
TgfaP48030 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.37□□□□□ -0.75
TgfaP48030 Gm3619-201ENSMUST00000219947 775 ntBASIC10.37□□□□□ -0.75
TgfaP48030 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.37□□□□□ -0.75
TgfaP48030 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.37□□□□□ -0.75
TgfaP48030 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
TgfaP48030 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.37□□□□□ -0.75
TgfaP48030 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
TgfaP48030 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
TgfaP48030 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.36□□□□□ -0.75
TgfaP48030 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.36□□□□□ -0.75
TgfaP48030 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.36□□□□□ -0.75
TgfaP48030 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
TgfaP48030 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms