Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm22323-201ENSMUST00000103832 109 ntBASIC13.06□□□□□ -0.32
Rpl13P47963 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.06□□□□□ -0.32
Rpl13P47963 AA914427-201ENSMUST00000193194 1166 ntBASIC13.06□□□□□ -0.32
Rpl13P47963 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.06□□□□□ -0.32
Rpl13P47963 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm8956-201ENSMUST00000203939 825 ntBASIC13.06□□□□□ -0.32
Rpl13P47963 Gm4607-201ENSMUST00000206649 577 ntBASIC13.06□□□□□ -0.32
Rpl13P47963 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Rpl13P47963 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.06□□□□□ -0.32
Rpl13P47963 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.06□□□□□ -0.32
Rpl13P47963 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.06□□□□□ -0.32
Rpl13P47963 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rpl13P47963 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rpl13P47963 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Rpl13P47963 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rpl13P47963 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rpl13P47963 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rpl13P47963 Gm13665-201ENSMUST00000120830 528 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 Gm25668-201ENSMUST00000157700 129 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.05□□□□□ -0.32
Rpl13P47963 Gm43962-201ENSMUST00000203898 190 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Rpl13P47963 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rpl13P47963 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Rpl13P47963 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rpl13P47963 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Rpl13P47963 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.05□□□□□ -0.32
Rpl13P47963 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rpl13P47963 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.04□□□□□ -0.32
Rpl13P47963 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.04□□□□□ -0.32
Rpl13P47963 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.04□□□□□ -0.32
Rpl13P47963 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.04□□□□□ -0.32
Rpl13P47963 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rpl13P47963 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.04□□□□□ -0.32
Rpl13P47963 Gm14441-201ENSMUST00000121960 540 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms