Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sox18P43680 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Sox18P43680 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox18P43680 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 Gm42822-201ENSMUST00000200507 1529 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Gm12857-201ENSMUST00000117678 592 ntBASIC11.66□□□□□ -0.54
Sox18P43680 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox18P43680 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 Gm28388-201ENSMUST00000186262 437 ntBASIC11.66□□□□□ -0.54
Sox18P43680 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 Gm43520-201ENSMUST00000197996 164 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Gm4157-201ENSMUST00000211647 679 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Gm6722-201ENSMUST00000221586 390 ntBASIC11.66□□□□□ -0.54
Sox18P43680 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Gm8894-201ENSMUST00000074642 666 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox18P43680 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sox18P43680 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 AC154806.5-202ENSMUST00000227217 1443 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sox18P43680 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.66□□□□□ -0.54
Sox18P43680 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox18P43680 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.65□□□□□ -0.54
Sox18P43680 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Gm43216-201ENSMUST00000196295 1333 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox18P43680 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox18P43680 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Gm16071-201ENSMUST00000119589 793 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Gm13937-201ENSMUST00000121000 988 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Gm8737-201ENSMUST00000122208 642 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.65□□□□□ -0.54
Sox18P43680 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sox18P43680 Gm8343-201ENSMUST00000182705 994 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Gm17826-201ENSMUST00000189720 798 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Gm9645-201ENSMUST00000197131 792 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Gm44353-201ENSMUST00000200618 138 ntBASIC11.65□□□□□ -0.54
Sox18P43680 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC11.65□□□□□ -0.54
Sox18P43680 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sox18P43680 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 AC153544.1-201ENSMUST00000217988 400 ntBASIC11.65□□□□□ -0.54
Sox18P43680 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.65□□□□□ -0.54
Sox18P43680 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sox18P43680 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms