Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox6P40645 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox6P40645 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Gm4986-201ENSMUST00000119731 549 ntBASIC11.22□□□□□ -0.61
Sox6P40645 Gm13786-201ENSMUST00000122371 333 ntBASIC11.22□□□□□ -0.61
Sox6P40645 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox6P40645 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox6P40645 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox6P40645 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox6P40645 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Sox6P40645 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.22□□□□□ -0.61
Sox6P40645 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Olfr284-202ENSMUST00000206647 966 ntBASIC11.22□□□□□ -0.61
Sox6P40645 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.22□□□□□ -0.61
Sox6P40645 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Sox6P40645 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox6P40645 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox6P40645 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Sox6P40645 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.21□□□□□ -0.61
Sox6P40645 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.21□□□□□ -0.61
Sox6P40645 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.21□□□□□ -0.61
Sox6P40645 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Sox6P40645 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm13316-201ENSMUST00000140537 691 ntBASIC11.21□□□□□ -0.61
Sox6P40645 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Gm38158-201ENSMUST00000194617 339 ntBASIC11.21□□□□□ -0.61
Sox6P40645 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.21□□□□□ -0.61
Sox6P40645 Gm7046-201ENSMUST00000221351 977 ntBASIC11.21□□□□□ -0.61
Sox6P40645 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Sox6P40645 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.21□□□□□ -0.62
Sox6P40645 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Sox6P40645 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Sox6P40645 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.21□□□□□ -0.62
Sox6P40645 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Sox6P40645 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.2□□□□□ -0.62
Sox6P40645 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sox6P40645 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Sox6P40645 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms