Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.25□□□□□ -0.45
Cxcl12P40224 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cxcl12P40224 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm13422-201ENSMUST00000118834 504 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm23400-201ENSMUST00000174994 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm26463-201ENSMUST00000175065 101 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm24332-201ENSMUST00000175102 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25959-201ENSMUST00000175112 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm22475-201ENSMUST00000175169 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm22903-201ENSMUST00000175193 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25070-201ENSMUST00000175237 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm24159-201ENSMUST00000175264 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25299-201ENSMUST00000175283 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm23798-201ENSMUST00000175560 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm23802-201ENSMUST00000175565 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25708-201ENSMUST00000177687 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm24370-201ENSMUST00000178007 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm23049-201ENSMUST00000178068 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm28019-201ENSMUST00000178138 101 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25571-201ENSMUST00000178322 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25355-201ENSMUST00000178456 101 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm24975-201ENSMUST00000178492 101 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm23189-201ENSMUST00000178954 102 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm25100-201ENSMUST00000179750 101 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm23064-201ENSMUST00000179866 101 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm18776-201ENSMUST00000188833 654 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.24□□□□□ -0.45
Cxcl12P40224 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.24□□□□□ -0.45
Cxcl12P40224 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cxcl12P40224 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.23□□□□□ -0.45
Cxcl12P40224 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.23□□□□□ -0.45
Cxcl12P40224 Gm7504-201ENSMUST00000201449 424 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms