Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.28□□□□□ -0.6
TP20293 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TP20293 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TP20293 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
TP20293 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TP20293 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
TP20293 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
TP20293 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TP20293 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.27□□□□□ -0.61
TP20293 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.27□□□□□ -0.61
TP20293 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.27□□□□□ -0.61
TP20293 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.27□□□□□ -0.61
TP20293 Gm23912-201ENSMUST00000104687 87 ntBASIC11.27□□□□□ -0.61
TP20293 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.27□□□□□ -0.61
TP20293 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TP20293 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.27□□□□□ -0.61
TP20293 Gm4034-201ENSMUST00000187674 480 ntBASIC11.27□□□□□ -0.61
TP20293 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.27□□□□□ -0.61
TP20293 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.27□□□□□ -0.61
TP20293 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.27□□□□□ -0.61
TP20293 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.27□□□□□ -0.61
TP20293 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TP20293 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.27□□□□□ -0.61
TP20293 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TP20293 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TP20293 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.27□□□□□ -0.61
TP20293 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.27□□□□□ -0.61
TP20293 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TP20293 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TP20293 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.26□□□□□ -0.61
TP20293 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TP20293 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.26□□□□□ -0.61
TP20293 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.26□□□□□ -0.61
TP20293 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TP20293 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.26□□□□□ -0.61
TP20293 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.26□□□□□ -0.61
TP20293 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Gm25668-201ENSMUST00000157700 129 ntBASIC11.26□□□□□ -0.61
TP20293 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Gm18711-201ENSMUST00000199341 750 ntBASIC11.26□□□□□ -0.61
TP20293 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.26□□□□□ -0.61
TP20293 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.26□□□□□ -0.61
TP20293 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.26□□□□□ -0.61
TP20293 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.26□□□□□ -0.61
TP20293 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.26□□□□□ -0.61
TP20293 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.26□□□□□ -0.61
TP20293 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.26□□□□□ -0.61
TP20293 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TP20293 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TP20293 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.26□□□□□ -0.61
TP20293 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.26□□□□□ -0.61
TP20293 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TP20293 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.26□□□□□ -0.61
TP20293 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.26□□□□□ -0.61
TP20293 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TP20293 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
TP20293 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TP20293 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.26□□□□□ -0.61
TP20293 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.26□□□□□ -0.61
TP20293 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TP20293 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms