Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm9116-201ENSMUST00000192400 1018 ntBASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm18561-201ENSMUST00000206027 804 ntBASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC15.36■□□□□ 0.05
Hoxc9P09633 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.36■□□□□ 0.05
Hoxc9P09633 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hoxc9P09633 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.36■□□□□ 0.05
Hoxc9P09633 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hoxc9P09633 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.35■□□□□ 0.05
Hoxc9P09633 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm30671-201ENSMUST00000214898 318 ntBASIC15.35■□□□□ 0.05
Hoxc9P09633 Lgi3-203ENSMUST00000226548 1001 ntBASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm10263-201ENSMUST00000085163 300 ntBASIC15.35■□□□□ 0.05
Hoxc9P09633 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC15.35■□□□□ 0.05
Hoxc9P09633 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Hoxc9P09633 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hoxc9P09633 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm11422-201ENSMUST00000118925 1103 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm13117-201ENSMUST00000120894 691 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm11960-201ENSMUST00000122068 925 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm22877-201ENSMUST00000175451 105 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm27390-201ENSMUST00000184516 176 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.34■□□□□ 0.05
Hoxc9P09633 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm42599-201ENSMUST00000201308 469 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Hoxc9P09633 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC15.34■□□□□ 0.05
Hoxc9P09633 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC15.34■□□□□ 0.05
Hoxc9P09633 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Hoxc9P09633 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.34■□□□□ 0.05
Hoxc9P09633 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.34■□□□□ 0.05
Hoxc9P09633 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hoxc9P09633 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC15.34■□□□□ 0.05
Hoxc9P09633 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Hoxc9P09633 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hoxc9P09633 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms