Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC17.69■□□□□ 0.42
NclP09405 Gm10179-201ENSMUST00000086233 688 ntBASIC17.69■□□□□ 0.42
NclP09405 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NclP09405 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NclP09405 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NclP09405 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NclP09405 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Mup-ps26-201ENSMUST00000121751 202 ntBASIC17.68■□□□□ 0.42
NclP09405 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC17.68■□□□□ 0.42
NclP09405 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC17.68■□□□□ 0.42
NclP09405 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NclP09405 Gm5714-201ENSMUST00000197343 566 ntBASIC17.68■□□□□ 0.42
NclP09405 Gm45484-201ENSMUST00000210310 1141 ntBASIC17.68■□□□□ 0.42
NclP09405 AC153929.1-201ENSMUST00000219009 303 ntBASIC17.68■□□□□ 0.42
NclP09405 AC154290.1-201ENSMUST00000223786 1240 ntBASIC17.68■□□□□ 0.42
NclP09405 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.68■□□□□ 0.42
NclP09405 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 AC130671.2-201ENSMUST00000227224 1621 ntBASIC17.68■□□□□ 0.42
NclP09405 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NclP09405 Gm43417-201ENSMUST00000201586 5207 ntBASIC17.67■□□□□ 0.42
NclP09405 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC17.67■□□□□ 0.42
NclP09405 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.67■□□□□ 0.42
NclP09405 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm13916-201ENSMUST00000117368 628 ntBASIC17.67■□□□□ 0.42
NclP09405 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.67■□□□□ 0.42
NclP09405 Gm15566-201ENSMUST00000121130 590 ntBASIC17.67■□□□□ 0.42
NclP09405 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm7666-201ENSMUST00000146631 819 ntBASIC17.67■□□□□ 0.42
NclP09405 Gm17391-201ENSMUST00000171036 126 ntBASIC17.67■□□□□ 0.42
NclP09405 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC17.67■□□□□ 0.42
NclP09405 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC17.67■□□□□ 0.42
NclP09405 Ighv1-60-201ENSMUST00000195816 405 ntBASIC17.67■□□□□ 0.42
NclP09405 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC17.67■□□□□ 0.42
NclP09405 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC17.67■□□□□ 0.42
NclP09405 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NclP09405 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NclP09405 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC17.67■□□□□ 0.42
NclP09405 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC17.67■□□□□ 0.42
NclP09405 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC17.67■□□□□ 0.42
NclP09405 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NclP09405 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NclP09405 Gm37348-201ENSMUST00000193104 1789 ntBASIC17.66■□□□□ 0.42
NclP09405 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NclP09405 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NclP09405 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NclP09405 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NclP09405 Gm22144-201ENSMUST00000157402 102 ntBASIC17.66■□□□□ 0.42
NclP09405 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC17.66■□□□□ 0.42
NclP09405 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC17.66■□□□□ 0.42
NclP09405 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NclP09405 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC17.66■□□□□ 0.42
NclP09405 Gm38117-201ENSMUST00000194653 939 ntBASIC17.66■□□□□ 0.42
NclP09405 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Gm44126-201ENSMUST00000204831 514 ntBASIC17.66■□□□□ 0.42
NclP09405 Gm6781-201ENSMUST00000038304 1242 ntBASIC17.66■□□□□ 0.42
NclP09405 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms