Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Gm5369-201ENSMUST00000217499 588 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Matn2-203ENSMUST00000226766 3252 ntBASIC11.75□□□□□ -0.53
Hoxa4P06798 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Hoxa4P06798 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxa4P06798 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm14058-201ENSMUST00000116082 735 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Mir8093-201ENSMUST00000185043 137 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm45575-201ENSMUST00000210283 548 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.74□□□□□ -0.53
Hoxa4P06798 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Hoxa4P06798 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Hoxa4P06798 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxa4P06798 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm8199-201ENSMUST00000121323 823 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxa4P06798 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm27530-201ENSMUST00000184096 98 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.73□□□□□ -0.53
Hoxa4P06798 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.73□□□□□ -0.53
Hoxa4P06798 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxa4P06798 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms