Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Igh-VJ558P01758 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Paupar-201ENSMUST00000194826 3482 ntBASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm17376-201ENSMUST00000166016 84 ntBASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm7584-201ENSMUST00000175829 940 ntBASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm27320-201ENSMUST00000184892 109 ntBASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.28□□□□□ -0.76
Igh-VJ558P01758 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Igh-VJ558P01758 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm13996-201ENSMUST00000118456 430 ntBASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm13350-201ENSMUST00000120519 479 ntBASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm8343-201ENSMUST00000182705 994 ntBASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Gm43002-201ENSMUST00000200310 155 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms